Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | Positive | 209388 - 209463 | Not Available |
| hth-type transcriptional regulator cbl | AM464_RS01200 | Not Available | Negative | 209501 - 210451 | 35921.2 |
| nitrogen assimilation transcriptional regulator nac | AM464_RS01205 | Not Available | Negative | 210553 - 211470 | 32809.0 |
| Trna-asn | Not Available | Not Available | Positive | 211796 - 211871 | Not Available |
| l,d-transpeptidase | AM464_RS01215 | Not Available | Negative | 211927 - 212862 | 34480.3 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | AM464_RS01220 | Not Available | Negative | 212924 - 214003 | 36899.3 |
| adenosylcobinamide-gdp ribazoletransferase | AM464_RS01225 | Not Available | Negative | 214015 - 214758 | 26411.4 |
| duf1889 family protein | AM464_RS01230 | Not Available | Negative | 214755 - 215301 | 17227.4 |
| duf1889 family protein | AM464_RS30545 | Not Available | Negative | 215435 - 215608 | 6237.54 |
| duf1889 family protein | AM464_RS30550 | Not Available | Negative | 215605 - 215793 | 6998.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




