Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-cystine abc transporter atp-binding protein tcyn | AM464_RS00500 | Not Available | Negative | 101896 - 102648 | 27677.7 |
| cystine abc transporter permease | AM464_RS00505 | Not Available | Negative | 102645 - 103313 | 24802.7 |
| d-cysteine desulfhydrase | AM464_RS00510 | Not Available | Negative | 103328 - 104314 | 35097.4 |
| cystine abc transporter substrate-binding protein | AM464_RS00515 | Not Available | Negative | 104419 - 105219 | 28996.8 |
| flagella biosynthesis regulatory protein fliz | AM464_RS00520 | Not Available | Negative | 105307 - 105858 | 21541.9 |
| rna polymerase sigma factor flia | AM464_RS00525 | Not Available | Negative | 105904 - 106623 | 27522.8 |
| flagellin | AM464_RS00530 | Not Available | Negative | 106788 - 108362 | 55099.7 |
| flagellar filament capping protein flid | AM464_RS00535 | Not Available | Positive | 108617 - 110029 | 50405.1 |
| flagellar export chaperone flis | AM464_RS00540 | Not Available | Positive | 110044 - 110454 | 14995.0 |
| flagella biosynthesis regulatory protein flit | AM464_RS00545 | Not Available | Positive | 110454 - 110819 | 13843.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




