Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | AM464_RS29785 | Not Available | Negative | 191365 - 192375 | 37741.0 |
| Putative cii repressor | AM464_RS01080 | Not Available | Negative | 192446 - 192871 | 16033.4 |
| Prophage antirepressor | AM464_RS01085 | Not Available | Negative | 192855 - 193136 | 10647.8 |
| Prophage repressor | AM464_RS01090 | Not Available | Positive | 193238 - 193657 | 16285.5 |
| Hypothetical protein | AM464_RS01095 | Not Available | Positive | 193924 - 194079 | 5792.67 |
| protein ydfb | AM464_RS30960 | Not Available | Positive | 194081 - 194209 | 4739.3 |
| protein ydfc | AM464_RS01105 | Not Available | Positive | 194239 - 194457 | 8350.92 |
| Regulatory protein rha | AM464_RS01115 | Not Available | Positive | 195045 - 195896 | 31226.7 |
| Host killing protein | AM464_RS01120 | Not Available | Positive | 195942 - 196163 | 8408.15 |
| Exodeoxyribonuclease viii | AM464_RS01125 | Not Available | Positive | 196283 - 198736 | 90413.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




