Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system secretin trak | AM464_RS29045 | Not Available | Negative | 19382 - 20110 | 25628.6 |
| type iv conjugative transfer system protein trae | AM464_RS29050 | Not Available | Negative | 20097 - 20663 | 21225.5 |
| type iv conjugative transfer system protein tral | AM464_RS29055 | Not Available | Negative | 20685 - 20996 | 11904.7 |
| type iv conjugative transfer system pilin traa | AM464_RS29060 | Not Available | Negative | 21011 - 21376 | 12769.3 |
| conjugal transfer relaxosome dna-bindin protein tray | AM464_RS29065 | Not Available | Negative | 21409 - 21804 | 15184.2 |
| conjugal transfer transcriptional regulator traj | AM464_RS29070 | Not Available | Negative | 21903 - 22592 | 27063.2 |
| conjugal transfer relaxosome dna-binding protein tram | AM464_RS29075 | Not Available | Negative | 22779 - 23162 | 14518.3 |
| transglycosylase slt domain-containing protein | AM464_RS29080 | Not Available | Positive | 23483 - 24085 | 22837.8 |
| duf932 domain-containing protein | AM464_RS29085 | Not Available | Negative | 24382 - 25203 | 31591.7 |
| hypothetical protein | AM464_RS29090 | Not Available | Negative | 25324 - 25611 | 11007.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




