Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine efflux protein leue | AM464_RS26955 | Not Available | Negative | 5158094 - 5158732 | 23202.0 |
| dna-binding transcriptional regulator dmlr | AM464_RS26960 | Not Available | Negative | 5158859 - 5159782 | 34606.8 |
| multifunctional d-malate/3-isopropylmalate/tartarate dehydrogenase | AM464_RS26965 | Not Available | Positive | 5159885 - 5160970 | 40317.2 |
| duf1889 family protein | AM464_RS26970 | Not Available | Positive | 5161125 - 5162606 | 54125.8 |
| carnitine monooxygenase, oxygenase subunit yeaw | AM464_RS26975 | Not Available | Positive | 5162638 - 5163762 | 42563.0 |
| carnitine monooxygenase reductase subunit yeax | AM464_RS26980 | Not Available | Positive | 5163818 - 5164783 | 35663.2 |
| ribonuclease d | AM464_RS26985 | Not Available | Negative | 5164837 - 5165952 | 42200.0 |
| long-chain-fatty-acid--coa ligase fadd | AM464_RS26990 | Not Available | Negative | 5166034 - 5167719 | 62335.7 |
| slp family lipoprotein yeay | AM464_RS26995 | Not Available | Negative | 5167924 - 5168505 | 20936.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | AM464_RS27000 | Not Available | Negative | 5168545 - 5169240 | 25182.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




