Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration dna helicase ruvb | AM464_RS00050 | Not Available | Negative | 10041 - 11051 | 37176.0 |
| holliday junction branch migration protein ruva | AM464_RS00055 | Not Available | Negative | 11060 - 11671 | 22086.0 |
| stress response small protein yobi | AM464_RS00060 | Not Available | Negative | 11810 - 11875 | 2680.43 |
| yebb family permuted papain-like enzyme | AM464_RS00065 | Not Available | Positive | 11946 - 12548 | 22633.1 |
| crossover junction endodeoxyribonuclease ruvc | AM464_RS00070 | Not Available | Negative | 12550 - 13071 | 18747.9 |
| yebc/pmpr family dna-binding transcriptional regulator | AM464_RS00075 | Not Available | Negative | 13106 - 13846 | 26438.1 |
| dihydroneopterin triphosphate diphosphatase | AM464_RS00080 | Not Available | Negative | 13875 - 14327 | 17306.7 |
| aspartate--trna ligase | AM464_RS00085 | Not Available | Negative | 14445 - 16217 | 65917.2 |
| hydrolase | AM464_RS00090 | Not Available | Positive | 16527 - 17093 | 20443.3 |
| duf72 domain-containing protein | AM464_RS00095 | Not Available | Positive | 17090 - 17908 | 31480.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




