Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin-like protein | AM464_RS26270 | Not Available | Negative | 5031049 - 5031675 | 22368.2 |
| fumarate hydratase fumd | AM464_RS26275 | Not Available | Negative | 5032130 - 5032339 | 7907.85 |
| protein ynhh | AM464_RS30885 | Not Available | Positive | 5032694 - 5032888 | 7582.04 |
| pyruvate kinase pykf | AM464_RS26280 | Not Available | Positive | 5032896 - 5034308 | 50732.5 |
| murein lipoprotein lpp | AM464_RS26285 | Not Available | Positive | 5034619 - 5034855 | 8323.95 |
| l,d-transpeptidase ldte | AM464_RS26290 | Not Available | Negative | 5034919 - 5035923 | 36084.5 |
| cysteine desulfuration protein sufe | AM464_RS26295 | Not Available | Negative | 5036072 - 5036488 | 15801.2 |
| cysteine desulfurase sufs | AM464_RS26300 | Not Available | Negative | 5036501 - 5037721 | 44436.4 |
| fe-s cluster assembly protein sufd | AM464_RS26305 | Not Available | Negative | 5037718 - 5038989 | 46825.5 |
| fe-s cluster assembly atpase sufc | AM464_RS26310 | Not Available | Negative | 5038964 - 5039710 | 27584.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




