Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal kinase | AM464_RS26070 | Not Available | Negative | 4992151 - 4993014 | 31324.1 |
| tyrosine--trna ligase | AM464_RS26075 | Not Available | Negative | 4993073 - 4994347 | 47529.6 |
| pyridoxamine 5'-phosphate oxidase | AM464_RS26080 | Not Available | Negative | 4994476 - 4995132 | 25546.6 |
| c-type lysozyme inhibitor | AM464_RS26085 | Not Available | Negative | 4995191 - 4995520 | 12568.2 |
| anhydro-n-acetylmuramic acid kinase | AM464_RS26090 | Not Available | Negative | 4995618 - 4996727 | 39526.7 |
| outer membrane lipoprotein slyb | AM464_RS26095 | Not Available | Positive | 4997001 - 4997468 | 15602.7 |
| transcriptional regulator slya | AM464_RS26100 | Not Available | Negative | 4997515 - 4997949 | 16354.0 |
| duf1656 domain-containing protein | AM464_RS26105 | Not Available | Positive | 4998150 - 4998386 | 8891.33 |
| hlyd family secretion protein | AM464_RS26110 | Not Available | Positive | 4998389 - 4999246 | 31497.5 |
| duf1889 family protein | AM464_RS26115 | Not Available | Positive | 4999246 - 5001258 | 75084.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




