Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Qin prophage | AM464_RS25705 | Not Available | Negative | 4924285 - 4924860 | 21294.8 |
| Qin prophage | AM464_RS25710 | Not Available | Negative | 4924860 - 4925783 | 31624.4 |
| Putative small terminase subunit | AM464_RS25715 | Not Available | Negative | 4925767 - 4925994 | 8234.82 |
| Is3 transposase b | AM464_RS25720 | Not Available | Negative | 4926466 - 4927095 | 24088.7 |
| Bacteriophage excisionase | AM464_RS25725 | Not Available | Positive | 4927125 - 4927319 | 7616.17 |
| Putative integrase | AM464_RS25730 | Not Available | Positive | 4927354 - 4928634 | 48368.3 |
| Zinc-containing alcohol dehydrogenase superfamily protein | AM464_RS25740 | Not Available | Negative | 4928822 - 4929841 | 36508.1 |
| starvation-sensing protein rspa | AM464_RS25745 | Not Available | Negative | 4929853 - 4931067 | 45971.0 |
| Attr | Not Available | Not Available | Positive | 4930837 - 4930849 | Not Available |
| ynfa family protein | AM464_RS25755 | Not Available | Negative | 4931273 - 4931599 | 11920.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




