Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1889 family protein | AM464_RS25370 | Not Available | Negative | 4857550 - 4858716 | 42987.5 |
| acid stress response transcriptional regulator ydeo | AM464_RS25375 | Not Available | Negative | 4859118 - 4859879 | 28772.9 |
| two-component system connector safa | AM464_RS25380 | Not Available | Negative | 4859954 - 4860151 | 7272.08 |
| acid resistance putative oxidoreductase ydep | AM464_RS25385 | Not Available | Negative | 4860399 - 4862678 | 83499.8 |
| fimbrial protein | AM464_RS25390 | Not Available | Negative | 4863012 - 4863926 | 32043.3 |
| fimbrial protein | AM464_RS25395 | Not Available | Negative | 4863985 - 4864488 | 18145.5 |
| duf1889 family protein | AM464_RS25400 | Not Available | Negative | 4864501 - 4864719 | 7850.42 |
| is1 family transposase | AM464_RS25405 | Not Available | Negative | 4864735 - 4865432 | 26490.2 |
| hypothetical protein | AM464_RS25415 | Not Available | Positive | 4865514 - 4865759 | 9553.67 |
| yiix/yebb-like n1pc/p60 family cysteine hydrolase | AM464_RS25420 | Not Available | Positive | 4866082 - 4866669 | 22491.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




