Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase-n subunit alpha | AM464_RS25265 | Not Available | Positive | 4832991 - 4836038 | 112853.0 |
| formate dehydrogenase n subunit beta | AM464_RS25270 | Not Available | Positive | 4836051 - 4836935 | 32240.4 |
| formate dehydrogenase-n subunit gamma | AM464_RS25275 | Not Available | Positive | 4836928 - 4837581 | 25370.0 |
| duf1889 family protein | AM464_RS25280 | Not Available | Negative | 4837810 - 4838094 | 10215.5 |
| alcohol dehydrogenase adhp | AM464_RS25285 | Not Available | Negative | 4838240 - 4839250 | 35381.6 |
| malate dehydrogenase | AM464_RS25290 | Not Available | Negative | 4839384 - 4841081 | 63201.0 |
| stationary-phase-induced ribosome-associated protein | AM464_RS25295 | Not Available | Negative | 4841238 - 4841375 | 5096.13 |
| biofilm-dependent modulation protein | AM464_RS25300 | Not Available | Negative | 4841477 - 4841692 | 7987.26 |
| peroxiredoxin osmc | AM464_RS25310 | Not Available | Positive | 4842037 - 4842468 | 15101.0 |
| abc transporter atp-binding protein | AM464_RS25315 | Not Available | Negative | 4842524 - 4843450 | 34623.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




