Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ymje | AM464_RS30050 | Not Available | Negative | 4690645 - 4690809 | 5971.24 |
| glutamate-putrescine ligase | AM464_RS24565 | Not Available | Negative | 4690958 - 4692376 | 53180.2 |
| duf1889 family protein | AM464_RS24570 | Not Available | Positive | 4692588 - 4693352 | 27828.5 |
| hth-type transcriptional regulator puur | AM464_RS24575 | Not Available | Positive | 4693379 - 4693936 | 20092.8 |
| aldehyde dehydrogenase puuc | AM464_RS24585 | Not Available | Positive | 4694211 - 4695698 | 53421.6 |
| gamma-glutamylputrescine oxidase | AM464_RS24590 | Not Available | Positive | 4695700 - 4696980 | 47172.3 |
| 4-aminobutyrate transaminase | AM464_RS24595 | Not Available | Positive | 4697018 - 4698283 | 44731.7 |
| phage shock protein operon transcriptional activator | AM464_RS24600 | Not Available | Negative | 4698403 - 4699380 | 36962.6 |
| phage shock protein pspa | AM464_RS24605 | Not Available | Positive | 4699547 - 4700215 | 25494.4 |
| envelope stress response membrane protein pspb | AM464_RS24610 | Not Available | Positive | 4700269 - 4700493 | 8763.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




