Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycin family protein | AM464_RS24405 | Not Available | Negative | 4661885 - 4662136 | 9386.17 |
| type i dna topoisomerase | AM464_RS24415 | Not Available | Positive | 4662516 - 4665113 | 97355.0 |
| hth-type transcriptional regulator cysb | AM464_RS24425 | Not Available | Positive | 4665323 - 4666297 | 36152.5 |
| ymia family putative membrane protein | AM464_RS24430 | Not Available | Positive | 4666616 - 4666756 | 5337.71 |
| protein ycix | AM464_RS24435 | Not Available | Positive | 4666759 - 4666926 | 6338.19 |
| small membrane protein ymic | AM464_RS30045 | Not Available | Positive | 4667040 - 4667135 | 3822.77 |
| aconitate hydratase acna | AM464_RS24445 | Not Available | Positive | 4667299 - 4669974 | 97652.8 |
| gtp cyclohydrolase ii | AM464_RS24450 | Not Available | Negative | 4670038 - 4670628 | 21837.3 |
| phosphatidylglycerophosphatase b | AM464_RS24455 | Not Available | Positive | 4670798 - 4671562 | 29022.8 |
| lipopolysaccharide assembly protein lapa | AM464_RS24460 | Not Available | Positive | 4671711 - 4672019 | 11352.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




