Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trp operon leader peptide | AM464_RS24350 | Not Available | Negative | 4653729 - 4653773 | 1723.19 |
| rnase rnm | AM464_RS24355 | Not Available | Positive | 4653911 - 4654792 | 32581.8 |
| l-threonylcarbamoyladenylate synthase | AM464_RS24360 | Not Available | Positive | 4654789 - 4655409 | 23213.2 |
| duf1889 family protein | AM464_RS24365 | Not Available | Positive | 4655437 - 4655853 | 15966.1 |
| is1-like element is1x2 family transposase | AM464_RS24375 | Not Available | Positive | 4655909 - 4656606 | 26476.2 |
| duf1889 family protein | AM464_RS24380 | Not Available | Positive | 4656622 - 4658109 | 55605.3 |
| 23s rrna pseudouridine(2605) synthase rlub | AM464_RS24385 | Not Available | Positive | 4658320 - 4659195 | 32713.4 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | AM464_RS24390 | Not Available | Negative | 4659235 - 4659825 | 22000.2 |
| ycik family oxidoreductase | AM464_RS24395 | Not Available | Negative | 4659822 - 4660580 | 27934.6 |
| protease sohb | AM464_RS24400 | Not Available | Positive | 4660800 - 4661849 | 39368.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




