Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone-like nucleoid-structuring protein h-ns | AM464_RS24205 | Not Available | Negative | 4625400 - 4625813 | 15540.5 |
| thymidine kinase | AM464_RS24210 | Not Available | Positive | 4626417 - 4627034 | 23415.9 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | AM464_RS24215 | Not Available | Negative | 4627336 - 4630011 | 96132.5 |
| protein ycht | AM464_RS30500 | Not Available | Positive | 4630404 - 4630457 | 1882.42 |
| naat family transporter yche | AM464_RS24220 | Not Available | Positive | 4630488 - 4631135 | 23488.7 |
| hypothetical protein | AM464_RS30035 | Not Available | Negative | 4631293 - 4631589 | 11286.6 |
| oligopeptide abc transporter substrate-binding protein oppa | AM464_RS24230 | Not Available | Positive | 4631873 - 4633504 | 60979.1 |
| oligopeptide abc transporter permease oppb | AM464_RS24235 | Not Available | Positive | 4633590 - 4634510 | 33445.3 |
| oligopeptide abc transporter permease oppc | AM464_RS24240 | Not Available | Positive | 4634525 - 4635433 | 33023.9 |
| murein tripeptide/oligopeptide abc transporter atp-binding protein oppd | AM464_RS24245 | Not Available | Positive | 4635445 - 4636458 | 37148.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




