Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacetone kinase subunit dhak | AM464_RS23975 | Not Available | Negative | 4583015 - 4584085 | 38217.4 |
| dihydroxyacetone kinase operon transcriptional regulator dhar | AM464_RS23980 | Not Available | Positive | 4584313 - 4586232 | 70565.9 |
| autotransporter outer membrane beta-barrel domain-containing protein | AM464_RS23985 | Not Available | Negative | 4586332 - 4589199 | 99702.7 |
| redox-regulated atpase ychf | AM464_RS24000 | Not Available | Negative | 4589968 - 4591059 | 39669.6 |
| aminoacyl-trna hydrolase | AM464_RS24005 | Not Available | Negative | 4591176 - 4591760 | 21083.5 |
| stress-induced protein ychh | AM464_RS24010 | Not Available | Positive | 4592038 - 4592316 | 10486.9 |
| c4-dicarboxylic acid transporter daua | AM464_RS24015 | Not Available | Negative | 4592371 - 4594050 | 59432.8 |
| ribose-phosphate diphosphokinase | AM464_RS24025 | Not Available | Negative | 4594175 - 4595122 | 34220.3 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | AM464_RS24035 | Not Available | Negative | 4595273 - 4596124 | 30927.1 |
| lipoprotein insertase outer membrane protein lolb | AM464_RS24040 | Not Available | Negative | 4596124 - 4596747 | 23552.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




