Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron uptake transporter deferrochelatase/peroxidase subunit | AM464_RS23120 | Not Available | Positive | 4431828 - 4433099 | 46756.9 |
| phosphate starvation-inducible protein phoh | AM464_RS23125 | Not Available | Positive | 4433720 - 4434508 | 29268.4 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | AM464_RS23130 | Not Available | Negative | 4434558 - 4434971 | 16082.7 |
| poly-beta-1,6-n-acetyl-d-glucosamine synthase | AM464_RS23135 | Not Available | Negative | 4434973 - 4436298 | 50768.6 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | AM464_RS23140 | Not Available | Negative | 4436291 - 4438309 | 77358.8 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | AM464_RS23145 | Not Available | Negative | 4438318 - 4440741 | 92211.9 |
| ggdef domain-containing protein | AM464_RS23150 | Not Available | Positive | 4441328 - 4442677 | 51472.2 |
| is3-like element is3 family transposase | AM464_RS23155 | Not Available | Negative | 4442727 - 4443889 | 45023.8 |
| duf1889 family protein | AM464_RS23160 | Not Available | Positive | 4443957 - 4444298 | 12773.4 |
| protein ycdu | AM464_RS23165 | Not Available | Positive | 4444295 - 4445281 | 38670.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




