Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ni/fe-hydrogenase large subunit | AM464_RS22860 | Not Available | Positive | 4381704 - 4383497 | 66257.0 |
| ni/fe-hydrogenase b-type cytochrome subunit | AM464_RS22865 | Not Available | Positive | 4383516 - 4384223 | 27598.8 |
| hydrogenase 1 maturation protease | AM464_RS22870 | Not Available | Positive | 4384220 - 4384807 | 21547.7 |
| hydrogenase-1 operon protein hyae | AM464_RS22875 | Not Available | Positive | 4384804 - 4385202 | 14890.6 |
| hydrogenase expression/formation protein | AM464_RS22880 | Not Available | Positive | 4385199 - 4386056 | 31432.5 |
| cytochrome bd-ii oxidase subunit 1 | AM464_RS22885 | Not Available | Positive | 4386190 - 4387734 | 57924.2 |
| cytochrome d ubiquinol oxidase subunit ii | AM464_RS22890 | Not Available | Positive | 4387746 - 4388882 | 42426.3 |
| cytochrome bd-ii oxidase subunit cbdx | AM464_RS22895 | Not Available | Positive | 4388895 - 4388987 | 3597.68 |
| bifunctional acid phosphatase/4-phytase | AM464_RS22900 | Not Available | Positive | 4389067 - 4390365 | 47059.5 |
| tyrosine-protein kinase | AM464_RS22905 | Not Available | Negative | 4390480 - 4392660 | 81140.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




