Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion protein hlyd | AM464_RS21405 | Not Available | Negative | 4104115 - 4105110 | 36287.7 |
| dna-binding transcriptional regulator cecr | AM464_RS21410 | Not Available | Negative | 4105113 - 4105784 | 25018.1 |
| atp-dependent rna helicase rhle | AM464_RS21415 | Not Available | Positive | 4106013 - 4107377 | 49992.4 |
| n-glycosidase ybia | AM464_RS21420 | Not Available | Negative | 4107609 - 4108091 | 18670.3 |
| atp-dependent dna helicase ding | AM464_RS21430 | Not Available | Positive | 4108211 - 4110361 | 81444.9 |
| dna-binding protein ybib | AM464_RS21435 | Not Available | Positive | 4110389 - 4111351 | 35050.7 |
| hydroxycarboxylate dehydrogenase hcxb | AM464_RS21440 | Not Available | Positive | 4111492 - 4112577 | 38899.3 |
| protein ybie | AM464_RS30485 | Not Available | Positive | 4112644 - 4112703 | 2006.37 |
| duf1471 family protein ybij | AM464_RS21445 | Not Available | Negative | 4112806 - 4113066 | 8568.2 |
| c4-type zinc finger protein ybii | AM464_RS21450 | Not Available | Negative | 4113331 - 4113597 | 9756.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




