Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1889 family protein | AM464_RS20820 | Not Available | Positive | 3997775 - 3998533 | 28866.6 |
| ybga family protein | AM464_RS20825 | Not Available | Positive | 3998684 - 3999193 | 20212.4 |
| deoxyribodipyrimidine photo-lyase | AM464_RS20830 | Not Available | Positive | 3999190 - 4000608 | 53669.8 |
| dipeptide permease dtpd | AM464_RS20835 | Not Available | Negative | 4000758 - 4002239 | 54162.1 |
| radiation resistance protein ybgi | AM464_RS20840 | Not Available | Positive | 4002510 - 4003253 | 26894.0 |
| 5-oxoprolinase subunit pxpb | AM464_RS20845 | Not Available | Positive | 4003276 - 4003932 | 23948.0 |
| 5-oxoprolinase subunit pxpc | AM464_RS20850 | Not Available | Positive | 4003926 - 4004858 | 34388.4 |
| 5-oxoprolinase subunit pxpa | AM464_RS20855 | Not Available | Positive | 4004848 - 4005582 | 25932.0 |
| endonuclease viii | AM464_RS20860 | Not Available | Positive | 4005618 - 4006409 | 29905.9 |
| abrb family transcriptional regulator | AM464_RS20865 | Not Available | Negative | 4006406 - 4007452 | 36886.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




