Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase subunit kdpb | AM464_RS20765 | Not Available | Negative | 3984671 - 3986719 | 72178.5 |
| potassium-transporting atpase subunit kdpa | AM464_RS20770 | Not Available | Negative | 3986742 - 3988415 | 59162.7 |
| k(+)-transporting atpase subunit f | AM464_RS20775 | Not Available | Negative | 3988415 - 3988504 | 3071.95 |
| ybfa family protein | AM464_RS20780 | Not Available | Positive | 3988817 - 3989023 | 8289.03 |
| duf1889 family protein | AM464_RS20790 | Not Available | Positive | 3989266 - 3993459 | 157758.0 |
| protein ybfb | AM464_RS20795 | Not Available | Positive | 3993459 - 3993785 | 12558.1 |
| duf1889 family protein | AM464_RS20800 | Not Available | Positive | 3993831 - 3995336 | 57793.9 |
| protein ybfc | AM464_RS20805 | Not Available | Positive | 3995333 - 3995902 | 21962.6 |
| duf1889 family protein | AM464_RS20810 | Not Available | Positive | 3996128 - 3996361 | 8940.75 |
| duf1889 family protein | AM464_RS20815 | Not Available | Positive | 3996508 - 3997644 | 43034.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




