Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fluoride efflux transporter crcb | AM464_RS20400 | Not Available | Negative | 3918371 - 3918754 | 13812.1 |
| deaminated glutathione amidase | AM464_RS20405 | Not Available | Positive | 3918847 - 3919635 | 28683.0 |
| twin-arginine translocase subunit tate | AM464_RS20410 | Not Available | Positive | 3919764 - 3919967 | 7024.71 |
| lipoyl synthase | AM464_RS20415 | Not Available | Negative | 3920068 - 3921033 | 36073.8 |
| ybef family transcriptional regulator | AM464_RS20425 | Not Available | Negative | 3921242 - 3922195 | 35958.5 |
| lipoyl(octanoyl) transferase lipb | AM464_RS20435 | Not Available | Negative | 3922454 - 3923095 | 23884.0 |
| duf493 family protein ybed | AM464_RS20440 | Not Available | Negative | 3923196 - 3923459 | 9827.92 |
| d-alanyl-d-alanine carboxypeptidase daca | AM464_RS20445 | Not Available | Negative | 3923569 - 3924780 | 44446.5 |
| endolytic peptidoglycan transglycosylase rlpa | AM464_RS20450 | Not Available | Negative | 3924919 - 3926007 | 37530.1 |
| peptidoglycan glycosyltransferase mrdb | AM464_RS20455 | Not Available | Negative | 3926018 - 3927130 | 40478.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




