Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate lyase holo-[acyl-carrier protein] synthase | AM464_RS20345 | Not Available | Negative | 3908300 - 3908851 | 20283.6 |
| citrate lyase subunit alpha | AM464_RS20350 | Not Available | Negative | 3908855 - 3910387 | 55194.0 |
| citrate (pro-3s)-lyase subunit beta | AM464_RS20355 | Not Available | Negative | 3910398 - 3911306 | 33111.6 |
| citrate lyase acyl carrier protein | AM464_RS20360 | Not Available | Negative | 3911303 - 3911599 | 10689.9 |
| [citrate (pro-3s)-lyase] ligase | AM464_RS20365 | Not Available | Negative | 3911614 - 3912672 | 40079.5 |
| sensor histidine kinase dpib | AM464_RS20370 | Not Available | Positive | 3913051 - 3914709 | 61687.8 |
| two-component response regulator dpia | AM464_RS20375 | Not Available | Positive | 3914678 - 3915358 | 25454.9 |
| anaerobic c4-dicarboxylate transporter dcuc | AM464_RS20380 | Not Available | Negative | 3915399 - 3916784 | 48415.3 |
| lipid iv(a) palmitoyltransferase pagp | AM464_RS20390 | Not Available | Positive | 3917373 - 3917933 | 21752.6 |
| transcription antiterminator/rna stability regulator cspe | AM464_RS20395 | Not Available | Positive | 3918108 - 3918317 | 7463.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




