Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein x | AM464_RS21800 | Not Available | Positive | 4182936 - 4183139 | 7592.02 |
| Holin | AM464_RS21805 | Not Available | Positive | 4183143 - 4183358 | 8113.98 |
| Lysozyme | AM464_RS21810 | Not Available | Positive | 4183339 - 4183854 | 18693.7 |
| Lysozyme subunit b | AM464_RS30865 | Not Available | Positive | 4183851 - 4184198 | 13302.9 |
| Outer-membrane spanin component | AM464_RS30490 | Not Available | Positive | 4184122 - 4184358 | 8427.32 |
| Recombinase family protein | AM464_RS21825 | Not Available | Negative | 4184434 - 4185006 | 21639.7 |
| Tail fiber protein | AM464_RS21830 | Not Available | Positive | 4185078 - 4185539 | 16663.6 |
| Tail fiber assembly protein | AM464_RS21835 | Not Available | Negative | 4185546 - 4186160 | 22327.8 |
| Tail fiber protein | AM464_RS21840 | Not Available | Negative | 4186160 - 4187923 | 61259.2 |
| Gp25, tail fiber | AM464_RS21845 | Not Available | Negative | 4187926 - 4188504 | 21332.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




