Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh nuclease yajd | AM464_RS19035 | Not Available | Positive | 3673485 - 3673832 | 13364.7 |
| nucleoside-specific channel-forming protein tsx | AM464_RS19040 | Not Available | Negative | 3674009 - 3674893 | 33590.6 |
| duf3251 domain-containing protein | AM464_RS19050 | Not Available | Negative | 3675192 - 3675731 | 19533.4 |
| transcriptional regulator nrdr | AM464_RS19055 | Not Available | Positive | 3675882 - 3676331 | 17229.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | AM464_RS19060 | Not Available | Positive | 3676335 - 3677438 | 40340.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | AM464_RS19065 | Not Available | Positive | 3677527 - 3677997 | 16143.4 |
| transcription antitermination factor nusb | AM464_RS19070 | Not Available | Positive | 3678017 - 3678436 | 15689.9 |
| thiamine-phosphate kinase | AM464_RS19075 | Not Available | Positive | 3678514 - 3679491 | 35106.8 |
| phosphatidylglycerophosphatase a | AM464_RS19080 | Not Available | Positive | 3679469 - 3679987 | 19419.2 |
| 1-deoxyxylulose-5-phosphate synthase yajo | AM464_RS19085 | Not Available | Negative | 3680041 - 3681015 | 36422.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




