Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Regulatory protein ciii | AM464_RS30005 | Not Available | Negative | 4067542 - 4067706 | 6047.25 |
| Putative single-stranded dna binding protein | AM464_RS21190 | Not Available | Negative | 4067779 - 4068147 | 13781.1 |
| Superinfection exclusion protein | AM464_RS21195 | Not Available | Positive | 4068408 - 4068989 | 22495.6 |
| Antitermination protein n | AM464_RS21200 | Not Available | Negative | 4069006 - 4069278 | 10011.2 |
| Repressor protein c2 | AM464_RS21205 | Not Available | Negative | 4069591 - 4070241 | 24038.9 |
| Antitermination protein q | AM464_RS21210 | Not Available | Positive | 4070504 - 4070881 | 14043.2 |
| lipocalin family protein | AM464_RS21215 | Not Available | Negative | 4071037 - 4071561 | 19798.7 |
| ybga family protein | AM464_RS21220 | Not Available | Positive | 4071754 - 4072713 | 36932.8 |
| helix-turn-helix domain-containing protein | AM464_RS21225 | Not Available | Positive | 4073065 - 4073796 | 27935.1 |
| Putative holin | AM464_RS21230 | Not Available | Positive | 4073984 - 4074199 | 7778.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




