Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | AM464_RS18095 | Not Available | Positive | 3494720 - 3494947 | 9107.03 |
| duf1889 family protein | AM464_RS30795 | Not Available | Positive | 3495104 - 3495305 | 6806.62 |
| yfji family protein | AM464_RS18105 | Not Available | Positive | 3495521 - 3496954 | 54432.5 |
| inovirus-type gp2 protein | AM464_RS18110 | Not Available | Positive | 3497813 - 3498376 | 22484.0 |
| is256-like element is1414 family transposase | AM464_RS18115 | Not Available | Negative | 3498666 - 3499874 | 45775.2 |
| duf1889 family protein | AM464_RS18120 | Not Available | Negative | 3500025 - 3501360 | 46354.8 |
| duf1889 family protein | AM464_RS18130 | Not Available | Negative | 3501854 - 3501973 | 4687.01 |
| duf1889 family protein | AM464_RS18135 | Not Available | Negative | 3502052 - 3502282 | 8931.03 |
| abc transporter atp-binding protein | AM464_RS18140 | Not Available | Negative | 3502426 - 3503535 | 41338.3 |
| maltodextrin abc transporter substrate-binding protein | AM464_RS18145 | Not Available | Positive | 3503892 - 3505124 | 44288.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




