Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1889 family protein | AM464_RS17950 | Not Available | Positive | 3468115 - 3468483 | 14060.7 |
| 2-oxoglutaramate amidase | AM464_RS17955 | Not Available | Negative | 3468543 - 3469310 | 28812.3 |
| ivy family c-type lysozyme inhibitor | AM464_RS17960 | Not Available | Positive | 3469491 - 3469937 | 15996.1 |
| acyl-coa dehydrogenase fade | AM464_RS17965 | Not Available | Negative | 3469980 - 3472424 | 89201.7 |
| d-sedoheptulose 7-phosphate isomerase | AM464_RS17970 | Not Available | Positive | 3472664 - 3473242 | 20816.0 |
| duf1889 family protein | AM464_RS31070 | Not Available | Negative | 3473248 - 3473381 | 4742.8 |
| class ii glutamine amidotransferase | AM464_RS17975 | Not Available | Positive | 3473448 - 3474215 | 28580.1 |
| peptidoglycan meso-diaminopimelic acid protein amidase | AM464_RS17980 | Not Available | Negative | 3474186 - 3474926 | 28022.8 |
| type ii toxin-antitoxin system mrna interferase toxin yafq | AM464_RS17985 | Not Available | Negative | 3475082 - 3475360 | 10831.2 |
| type ii toxin-antitoxin system antitoxin dinj | AM464_RS17990 | Not Available | Negative | 3475363 - 3475623 | 9392.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




