Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AM464_RS17900 | Not Available | Positive | 3460067 - 3460867 | 30070.8 |
| hypothetical protein | AM464_RS30300 | Not Available | Negative | 3460993 - 3461202 | 8142.8 |
| duf1311 domain-containing protein | AM464_RS17910 | Not Available | Negative | 3461346 - 3461795 | 17260.9 |
| hypothetical protein | AM464_RS17915 | Not Available | Negative | 3461798 - 3462394 | 22562.1 |
| duf1889 family protein | AM464_RS17920 | Not Available | Negative | 3462476 - 3462695 | 8294.61 |
| hcp family type vi secretion system effector | AM464_RS17925 | Not Available | Negative | 3462716 - 3463195 | 17883.2 |
| duf1889 family protein | AM464_RS17930 | Not Available | Negative | 3463161 - 3463659 | 18957.7 |
| type vi secretion system tip protein vgrg | AM464_RS17935 | Not Available | Positive | 3463633 - 3465495 | 69941.9 |
| rhs repeat-associated core domain-containing protein | AM464_RS17940 | Not Available | Positive | 3465708 - 3466814 | 40077.1 |
| tetratricopeptide repeat protein | AM464_RS17945 | Not Available | Positive | 3466798 - 3467811 | 37939.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




