Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster insertion protein erpa | AM464_RS17585 | Not Available | Positive | 3400111 - 3400455 | 12101.2 |
| tric cation channel family protein | AM464_RS17590 | Not Available | Negative | 3400502 - 3401125 | 22129.1 |
| vitamin b12 abc transporter substrate-binding protein btuf | AM464_RS17595 | Not Available | Negative | 3401163 - 3401963 | 29358.4 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | AM464_RS17600 | Not Available | Negative | 3401956 - 3402654 | 24355.4 |
| dgtpase | AM464_RS17605 | Not Available | Positive | 3402738 - 3404255 | 59444.2 |
| serine endoprotease degp | AM464_RS17615 | Not Available | Positive | 3404385 - 3405809 | 49357.3 |
| dna-binding transcriptional regulator cdar | AM464_RS17620 | Not Available | Positive | 3405964 - 3407121 | 43660.1 |
| duf3461 family protein | AM464_RS17625 | Not Available | Negative | 3407210 - 3407596 | 15097.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | AM464_RS17630 | Not Available | Negative | 3407911 - 3408735 | 29893.8 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | AM464_RS17635 | Not Available | Negative | 3408766 - 3411438 | 102474.0 |
Pathways
516 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




