Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase hrpb | AM464_RS17540 | Not Available | Positive | 3385777 - 3388206 | 89099.2 |
| bifunctional glycosyl transferase/transpeptidase | AM464_RS17550 | Not Available | Positive | 3388402 - 3390936 | 94270.0 |
| ferrichrome porin fhua | AM464_RS17555 | Not Available | Positive | 3391156 - 3393351 | 81274.2 |
| fe3+-hydroxamate abc transporter atp-binding protein fhuc | AM464_RS17560 | Not Available | Positive | 3393402 - 3394199 | 28872.2 |
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | AM464_RS17565 | Not Available | Positive | 3394199 - 3395089 | 33060.3 |
| fe(3+)-hydroxamate abc transporter permease fhub | AM464_RS17570 | Not Available | Positive | 3395086 - 3397068 | 70381.5 |
| glutamate-1-semialdehyde 2,1-aminomutase | AM464_RS17575 | Not Available | Negative | 3397103 - 3398383 | 45300.6 |
| protein yadx | AM464_RS30475 | Not Available | Positive | 3398549 - 3398596 | 1806.13 |
| h(+)/cl(-) exchange transporter clca | AM464_RS17580 | Not Available | Positive | 3398608 - 3400029 | 50337.9 |
| small protein yadw | AM464_RS29955 | Not Available | Positive | 3400053 - 3400118 | 2329.94 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




