Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yacl | AM464_RS17385 | Not Available | Positive | 3357987 - 3358349 | 13942.3 |
| adenosylmethionine decarboxylase | AM464_RS17390 | Not Available | Negative | 3358387 - 3359181 | 30386.3 |
| polyamine aminopropyltransferase | AM464_RS17395 | Not Available | Negative | 3359197 - 3360063 | 32309.1 |
| yacc family pilotin-like protein | AM464_RS17400 | Not Available | Negative | 3360169 - 3360516 | 12854.4 |
| multicopper oxidase cueo | AM464_RS17405 | Not Available | Positive | 3360682 - 3362232 | 56722.7 |
| quinoprotein glucose dehydrogenase | AM464_RS17410 | Not Available | Negative | 3362434 - 3364824 | 86782.1 |
| hypoxanthine phosphoribosyltransferase | AM464_RS17415 | Not Available | Positive | 3365030 - 3365566 | 20116.4 |
| carbonate dehydratase | AM464_RS17420 | Not Available | Negative | 3365607 - 3366269 | 25098.2 |
| abc transporter atp-binding protein | AM464_RS17425 | Not Available | Positive | 3366378 - 3367304 | 34649.2 |
| abc transporter permease | AM464_RS17430 | Not Available | Positive | 3367301 - 3368071 | 28517.9 |
Pathways
1052 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




