Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-lactamase regulator ampe | AM464_RS17325 | Not Available | Positive | 3340502 - 3341356 | 32148.9 |
| family 43 glycosylhydrolase | AM464_RS17330 | Not Available | Negative | 3341386 - 3342336 | 36608.9 |
| glycoside-pentoside-hexuronide (gph):cation symporter | AM464_RS17335 | Not Available | Negative | 3342336 - 3343742 | 52612.3 |
| aromatic amino acid transporter arop | AM464_RS17340 | Not Available | Negative | 3343901 - 3345274 | 49679.1 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | AM464_RS17345 | Not Available | Positive | 3345815 - 3346579 | 29427.2 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | AM464_RS17355 | Not Available | Positive | 3346740 - 3349403 | 99674.1 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | AM464_RS17360 | Not Available | Positive | 3349418 - 3351310 | 66099.8 |
| dihydrolipoyl dehydrogenase | AM464_RS17365 | Not Available | Positive | 3351518 - 3352942 | 50691.4 |
| duf3300 domain-containing protein | AM464_RS17370 | Not Available | Negative | 3353013 - 3354860 | 69034.2 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | AM464_RS17380 | Not Available | Positive | 3355215 - 3357812 | 93489.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




