Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | AM464_RS17225 | Not Available | Positive | 3320750 - 3321817 | 37788.9 |
| udp-n-acetylmuramate--l-alanine ligase | AM464_RS17230 | Not Available | Positive | 3321871 - 3323346 | 53600.1 |
| d-alanine--d-alanine ligase | AM464_RS17235 | Not Available | Positive | 3323339 - 3324259 | 32825.6 |
| cell division protein ftsq | AM464_RS17240 | Not Available | Positive | 3324261 - 3325091 | 31421.6 |
| cell division protein ftsa | AM464_RS17245 | Not Available | Positive | 3325088 - 3326350 | 45332.7 |
| cell division protein ftsz | AM464_RS17250 | Not Available | Positive | 3326411 - 3327562 | 40326.4 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | AM464_RS17255 | Not Available | Positive | 3327663 - 3328580 | 33957.8 |
| seca translation cis-regulator secm | AM464_RS17260 | Not Available | Positive | 3328811 - 3329323 | 18880.6 |
| preprotein translocase subunit seca | AM464_RS17265 | Not Available | Positive | 3329385 - 3332090 | 101975.0 |
| 8-oxo-dgtp diphosphatase mutt | AM464_RS17270 | Not Available | Positive | 3332150 - 3332548 | 15164.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




