Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | AM464_RS17070 | Not Available | Negative | 3287942 - 3289444 | 56077.2 |
| ribulokinase | AM464_RS17075 | Not Available | Negative | 3289455 - 3291155 | 61106.7 |
| arabinose operon transcriptional regulator arac | AM464_RS17085 | Not Available | Positive | 3291494 - 3292372 | 33385.8 |
| deda family protein | AM464_RS17090 | Not Available | Positive | 3292458 - 3293222 | 28245.8 |
| thiamine abc transporter atp-binding protein thiq | AM464_RS17095 | Not Available | Negative | 3293336 - 3294034 | 25000.8 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | AM464_RS17100 | Not Available | Negative | 3294018 - 3295628 | 59536.7 |
| thiamine abc transporter substrate binding subunit | AM464_RS17105 | Not Available | Negative | 3295604 - 3296587 | 36165.2 |
| dna-binding transcriptional regulator sgrr | AM464_RS17110 | Not Available | Negative | 3296751 - 3298406 | 63978.7 |
| glucose uptake inhibitor sgrt | AM464_RS17115 | Not Available | Positive | 3298495 - 3298626 | 5338.42 |
| sugar efflux transporter seta | AM464_RS17120 | Not Available | Positive | 3298728 - 3299906 | 42715.8 |
Pathways
585 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




