Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | AM464_RS16915 | Not Available | Positive | 3250724 - 3251872 | 41415.4 |
| carbamoyl-phosphate synthase large subunit | AM464_RS16920 | Not Available | Positive | 3251890 - 3255108 | 117763.0 |
| carnitine metabolism transcriptional regulator caif | AM464_RS16930 | Not Available | Positive | 3255369 - 3255764 | 15469.2 |
| carnitine operon protein caie | AM464_RS16935 | Not Available | Negative | 3255883 - 3256473 | 21189.7 |
| crotonobetainyl-coa hydratase | AM464_RS16940 | Not Available | Negative | 3256479 - 3257264 | 28218.8 |
| crotonobetaine/carnitine-coa ligase | AM464_RS16945 | Not Available | Negative | 3257373 - 3258926 | 58582.4 |
| l-carnitine coa-transferase | AM464_RS16950 | Not Available | Negative | 3259000 - 3260217 | 45113.3 |
| crotonobetainyl-coa dehydrogenase | AM464_RS16955 | Not Available | Negative | 3260335 - 3261477 | 42560.8 |
| l-carnitine/gamma-butyrobetaine antiporter | AM464_RS16960 | Not Available | Negative | 3261508 - 3263022 | 56590.4 |
| electron transfer flavoprotein fixa | AM464_RS16965 | Not Available | Positive | 3263495 - 3264265 | 27145.2 |
Pathways
918 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




