Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system effector espx1 | AM464_RS16860 | Not Available | Negative | 3239999 - 3241420 | 55820.9 |
| 30s ribosomal protein s20 | AM464_RS16865 | Not Available | Negative | 3241906 - 3242169 | 9684.94 |
| duf2575 family protein | AM464_RS16870 | Not Available | Positive | 3242272 - 3242490 | 7890.84 |
| bifunctional riboflavin kinase/fad synthetase | AM464_RS16875 | Not Available | Positive | 3242498 - 3243439 | 34736.4 |
| isoleucine--trna ligase | AM464_RS16880 | Not Available | Positive | 3243482 - 3246298 | 104345.0 |
| signal peptidase ii | AM464_RS16885 | Not Available | Positive | 3246298 - 3246792 | 18129.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | AM464_RS16890 | Not Available | Positive | 3246900 - 3247349 | 16081.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | AM464_RS16895 | Not Available | Positive | 3247351 - 3248301 | 34776.6 |
| ribonucleoside hydrolase rihc | AM464_RS16900 | Not Available | Positive | 3248367 - 3249281 | 32571.7 |
| 4-hydroxy-tetrahydrodipicolinate reductase | AM464_RS16905 | Not Available | Positive | 3249448 - 3250269 | 28744.3 |
Pathways
653 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




