Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2541 family protein | AM464_RS16810 | Not Available | Negative | 3228070 - 3228474 | 14482.4 |
| molecular chaperone dnak | AM464_RS16815 | Not Available | Positive | 3228851 - 3230767 | 69118.9 |
| molecular chaperone dnaj | AM464_RS16820 | Not Available | Positive | 3230856 - 3231986 | 41074.7 |
| type i toxin-antitoxin system toxin mokc | AM464_RS16825 | Not Available | Negative | 3232090 - 3232242 | 5501.89 |
| na+/h+ antiporter nhaa | AM464_RS16830 | Not Available | Positive | 3232828 - 3233994 | 41358.3 |
| transcriptional activator nhar | AM464_RS16835 | Not Available | Positive | 3234060 - 3234959 | 34040.0 |
| hypothetical protein | AM464_RS16840 | Not Available | Negative | 3234997 - 3235956 | 35903.4 |
| duf1889 family protein | AM464_RS16845 | Not Available | Negative | 3235969 - 3238419 | 92076.8 |
| duf1889 family protein | AM464_RS16850 | Not Available | Negative | 3238432 - 3239114 | 25069.4 |
| fimbrial protein | AM464_RS16855 | Not Available | Negative | 3239164 - 3239697 | 19102.5 |
Pathways
874 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




