Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1889 family protein | AM464_RS30780 | Not Available | Positive | 3143631 - 3145508 | 69642.9 |
| 5-methylcytosine-specific restriction endonuclease system specificity protein mcrc | AM464_RS16410 | Not Available | Negative | 3145565 - 3146611 | 40592.0 |
| 5-methylcytosine-specific restriction endonuclease subunit mcrb | AM464_RS16415 | Not Available | Negative | 3146611 - 3147990 | 53190.1 |
| endoribonuclease syme | AM464_RS16420 | Not Available | Negative | 3148152 - 3148493 | 12203.7 |
| type i restriction-modification system specificity subunit | AM464_RS16425 | Not Available | Negative | 3148721 - 3150115 | 51398.1 |
| type i restriction-modification system methyltransferase | AM464_RS16430 | Not Available | Negative | 3150112 - 3151701 | 59309.8 |
| type i restriction-modification system endonuclease | AM464_RS16435 | Not Available | Negative | 3151902 - 3155414 | 134102.0 |
| adenine/cytosine-specific restriction endonuclease mrr | AM464_RS16440 | Not Available | Positive | 3155602 - 3156516 | 33535.8 |
| gtpase | AM464_RS16445 | Not Available | Negative | 3156562 - 3157518 | 35675.8 |
| ybdd/yjix family protein | AM464_RS16450 | Not Available | Negative | 3157529 - 3157732 | 7729.24 |
Pathways
505 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




