Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | AM464_RS16020 | Not Available | Negative | 3080196 - 3081424 | 46369.6 |
| protein ykie | AM464_RS30470 | Not Available | Positive | 3081632 - 3081700 | 2720.32 |
| duf1889 family protein | AM464_RS16030 | Not Available | Positive | 3081787 - 3082484 | 24890.9 |
| duf1889 family protein | AM464_RS31165 | Not Available | Negative | 3082495 - 3082564 | 2186.67 |
| duf1889 family protein | AM464_RS30760 | Not Available | Positive | 3082626 - 3082775 | 5695.86 |
| duf1889 family protein | AM464_RS16040 | Not Available | Positive | 3082802 - 3082906 | 4184.76 |
| biofilm development regulator ymgb/arir family protein | AM464_RS16050 | Not Available | Positive | 3083209 - 3083502 | 11348.8 |
| duf1889 family protein | AM464_RS16060 | Not Available | Negative | 3083840 - 3083971 | 4962.7 |
| duf1889 family protein | AM464_RS16065 | Not Available | Positive | 3084253 - 3084774 | 18253.7 |
| s-methyl-5-thioribose-1-phosphate isomerase | AM464_RS16070 | Not Available | Positive | 3084816 - 3085850 | 37324.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




