Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is4-like element isvsa5 family transposase | AM464_RS15905 | Not Available | Positive | 3060979 - 3062187 | 46076.1 |
| duf1889 family protein | AM464_RS15910 | Not Available | Positive | 3062187 - 3062630 | 16888.2 |
| duf1889 family protein | AM464_RS15915 | Not Available | Negative | 3062947 - 3064127 | 44290.4 |
| duf1889 family protein | AM464_RS15930 | Not Available | Positive | 3064714 - 3064943 | 8287.29 |
| hypothetical protein | AM464_RS15935 | Not Available | Positive | 3065286 - 3065429 | 5173.12 |
| is4-like element is4 family transposase | AM464_RS15940 | Not Available | Negative | 3065457 - 3066803 | 51173.8 |
| mfs transporter | AM464_RS15945 | Not Available | Positive | 3067412 - 3068629 | 44106.1 |
| 2,7-anhydro-n-acetylneuraminate hydratase | AM464_RS15950 | Not Available | Positive | 3068641 - 3069759 | 41386.9 |
| protein ytha | AM464_RS15955 | Not Available | Positive | 3069802 - 3069927 | 4779.22 |
| surface-adhesin e family protein | AM464_RS15960 | Not Available | Negative | 3069980 - 3070237 | 9652.63 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




