Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biofilm peroxide resistance protein bsma | AM464_RS15530 | Not Available | Positive | 2990595 - 2990924 | 12038.7 |
| duf1471 family protease activator yjfn | AM464_RS15535 | Not Available | Positive | 2991073 - 2991348 | 9949.64 |
| isovaleryl-coa dehydrogenase | AM464_RS15545 | Not Available | Negative | 2991465 - 2993090 | 60608.5 |
| glutathionylspermidine synthase family protein | AM464_RS15550 | Not Available | Negative | 2993174 - 2994337 | 45025.9 |
| duf1190 domain-containing protein | AM464_RS15555 | Not Available | Negative | 2994340 - 2994978 | 23406.0 |
| duf350 domain-containing protein | AM464_RS15560 | Not Available | Negative | 2994988 - 2995386 | 14224.7 |
| yjfk family protein | AM464_RS15565 | Not Available | Negative | 2995404 - 2996063 | 25010.3 |
| pspa/im30 family protein | AM464_RS15570 | Not Available | Negative | 2996114 - 2996812 | 25335.0 |
| yjfi family protein | AM464_RS15575 | Not Available | Negative | 2996831 - 2997232 | 14935.8 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | AM464_RS15585 | Not Available | Negative | 2997359 - 2998090 | 26558.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




