Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase i | AM464_RS12605 | Not Available | Positive | 2420574 - 2423360 | 103152.0 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | AM464_RS12610 | Not Available | Negative | 2423742 - 2424374 | 23562.2 |
| duf1889 family protein | AM464_RS30695 | Not Available | Positive | 2424671 - 2424837 | 6289.25 |
| der gtpase-activating protein yihi | AM464_RS12615 | Not Available | Positive | 2424956 - 2425462 | 19011.4 |
| oxygen-independent coproporphyrinogen iii oxidase | AM464_RS12620 | Not Available | Positive | 2425651 - 2427024 | 52732.0 |
| yshb family small membrane protein | AM464_RS12625 | Not Available | Negative | 2427253 - 2427363 | 3618.45 |
| nitrogen regulation protein nr(i) | AM464_RS12630 | Not Available | Negative | 2427475 - 2428884 | 52257.9 |
| nitrogen regulation protein nr(ii) | AM464_RS12635 | Not Available | Negative | 2428896 - 2429945 | 38558.5 |
| glutamate--ammonia ligase | AM464_RS12640 | Not Available | Negative | 2430231 - 2431640 | 51906.6 |
| ribosome-dependent gtpase typa | AM464_RS12650 | Not Available | Positive | 2432013 - 2433836 | 67371.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




