Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii c-methyltransferase | AM464_RS12305 | Not Available | Negative | 2361449 - 2362678 | 44282.9 |
| uroporphyrinogen-iii synthase | AM464_RS12310 | Not Available | Negative | 2362700 - 2363440 | 27785.4 |
| hydroxymethylbilane synthase | AM464_RS12315 | Not Available | Negative | 2363437 - 2364378 | 33853.9 |
| class i adenylate cyclase | AM464_RS12325 | Not Available | Positive | 2364765 - 2367311 | 97591.4 |
| iron donor protein cyay | AM464_RS12330 | Not Available | Negative | 2367351 - 2367671 | 12232.0 |
| duf1889 family protein | AM464_RS30690 | Not Available | Negative | 2367833 - 2367975 | 5297.37 |
| lps translocon maturation chaperone lptm | AM464_RS12335 | Not Available | Positive | 2368134 - 2368337 | 7177.59 |
| diaminopimelate epimerase | AM464_RS12340 | Not Available | Positive | 2368374 - 2369198 | 30210.4 |
| duf484 domain-containing protein | AM464_RS12345 | Not Available | Positive | 2369195 - 2369902 | 26730.4 |
| tyrosine recombinase xerc | AM464_RS12350 | Not Available | Positive | 2369899 - 2370795 | 33869.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




