Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l34 | AM464_RS11790 | Not Available | Positive | 2257885 - 2258025 | 5380.74 |
| ribonuclease p protein component | AM464_RS11795 | Not Available | Positive | 2258042 - 2258401 | 13790.0 |
| membrane protein insertion efficiency factor yidd | AM464_RS11800 | Not Available | Positive | 2258365 - 2258622 | 9381.61 |
| membrane protein insertase yidc | AM464_RS11805 | Not Available | Positive | 2258625 - 2260271 | 61529.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | AM464_RS11810 | Not Available | Positive | 2260377 - 2261741 | 49233.8 |
| tryptophanase leader peptide | AM464_RS11815 | Not Available | Positive | 2261984 - 2262058 | 2894.56 |
| tryptophanase | AM464_RS11820 | Not Available | Positive | 2262279 - 2263694 | 52776.4 |
| low affinity tryptophan permease tnab | AM464_RS11825 | Not Available | Positive | 2263785 - 2265032 | 45255.3 |
| multidrug efflux mfs transporter mdtl | AM464_RS11830 | Not Available | Positive | 2265164 - 2266339 | 41522.3 |
| hth-type transcriptional regulator yidz | AM464_RS11835 | Not Available | Positive | 2266314 - 2267273 | 36883.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




