Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ysde | AM464_RS30455 | Not Available | Negative | 2229726 - 2229800 | 2827.45 |
| multidrug efflux mfs transporter emrd | AM464_RS11640 | Not Available | Positive | 2229882 - 2231066 | 42218.5 |
| radical sam protein | AM464_RS11645 | Not Available | Negative | 2231074 - 2231571 | 19188.9 |
| duf202 domain-containing protein | AM464_RS11650 | Not Available | Negative | 2231568 - 2231930 | 13769.1 |
| yidh family protein | AM464_RS11655 | Not Available | Negative | 2231920 - 2232267 | 12780.1 |
| rna-guided endonuclease insq/tnpb family protein | AM464_RS11660 | Not Available | Negative | 2232437 - 2233645 | 45677.0 |
| duf1889 family protein | AM464_RS30240 | Not Available | Positive | 2233653 - 2234083 | 16358.0 |
| duf1889 family protein | AM464_RS30685 | Not Available | Positive | 2234143 - 2234217 | 2595.92 |
| 6-phospho-alpha-glucosidase | AM464_RS11680 | Not Available | Negative | 2234214 - 2235536 | 49288.0 |
| duf1889 family protein | AM464_RS11685 | Not Available | Negative | 2235536 - 2237152 | 58163.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




