Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dutp diphosphatase | AM464_RS10985 | Not Available | Positive | 2115476 - 2115934 | 16288.7 |
| nucleoid occlusion factor slma | AM464_RS10990 | Not Available | Positive | 2116041 - 2116637 | 22837.7 |
| orotate phosphoribosyltransferase | AM464_RS10995 | Not Available | Negative | 2116674 - 2117315 | 23568.3 |
| ribonuclease ph | AM464_RS11000 | Not Available | Negative | 2117381 - 2118097 | 25327.4 |
| yicc/yloc family endoribonuclease | AM464_RS11010 | Not Available | Positive | 2118224 - 2119087 | 33160.9 |
| lytic transglycosylase domain-containing protein | AM464_RS11105 | Not Available | Positive | 2132318 - 2135038 | 95487.1 |
| hypothetical protein | AM464_RS11110 | Not Available | Positive | 2135189 - 2135887 | 24615.1 |
| abi family protein | AM464_RS11115 | Not Available | Positive | 2136783 - 2137745 | 37489.4 |
| hypothetical protein | AM464_RS11120 | Not Available | Negative | 2137747 - 2138202 | 16592.0 |
| perc family transcriptional regulator | AM464_RS11125 | Not Available | Positive | 2138462 - 2138749 | 11185.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




