Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide core heptose(i) kinase rfap | AM464_RS10935 | Not Available | Negative | 2106705 - 2107502 | 31111.1 |
| glycosyltransferase family 4 protein | AM464_RS10940 | Not Available | Negative | 2107495 - 2108619 | 42572.7 |
| lipopolysaccharide core heptosyltransferase rfaq | AM464_RS10945 | Not Available | Negative | 2108616 - 2109674 | 39448.9 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | AM464_RS10950 | Not Available | Positive | 2110087 - 2111364 | 47279.9 |
| pantetheine-phosphate adenylyltransferase | AM464_RS10955 | Not Available | Positive | 2111372 - 2111851 | 17895.7 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | AM464_RS10960 | Not Available | Negative | 2111890 - 2112699 | 30261.8 |
| 50s ribosomal protein l33 | AM464_RS10965 | Not Available | Negative | 2112797 - 2112964 | 6371.94 |
| 50s ribosomal protein l28 | AM464_RS10970 | Not Available | Negative | 2112985 - 2113221 | 9007.02 |
| radc family protein | AM464_RS10975 | Not Available | Negative | 2113438 - 2114106 | 25240.8 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | AM464_RS10980 | Not Available | Positive | 2114278 - 2115498 | 43440.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




