Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylulokinase | AM464_RS10570 | Not Available | Negative | 2031440 - 2032894 | 52650.4 |
| xylose isomerase | AM464_RS10575 | Not Available | Negative | 2032966 - 2034288 | 49735.7 |
| d-xylose abc transporter substrate-binding protein | AM464_RS10580 | Not Available | Positive | 2034654 - 2035646 | 35722.1 |
| d-xylose abc transporter atp-binding protein | AM464_RS10585 | Not Available | Positive | 2035724 - 2037265 | 56459.9 |
| xylose abc transporter permease xylh | AM464_RS10590 | Not Available | Positive | 2037243 - 2038424 | 41033.5 |
| d-xylose utilization transcriptional activator xylr | AM464_RS10595 | Not Available | Positive | 2038502 - 2039680 | 44871.7 |
| protein bax | AM464_RS10600 | Not Available | Negative | 2039876 - 2040700 | 30869.3 |
| alpha-amylase | AM464_RS10605 | Not Available | Positive | 2041020 - 2043050 | 75716.5 |
| valine--pyruvate transaminase | AM464_RS10610 | Not Available | Positive | 2043228 - 2044481 | 46714.9 |
| 4fe-4s dicluster domain-containing protein | AM464_RS10615 | Not Available | Negative | 2044632 - 2045105 | 17460.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




