Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate abc transporter permease ugpa | AM464_RS09940 | Not Available | Negative | 1894900 - 1895787 | 33265.6 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | AM464_RS09945 | Not Available | Negative | 1895885 - 1897201 | 48451.2 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livf | AM464_RS09950 | Not Available | Negative | 1897598 - 1898311 | 26325.9 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | AM464_RS09955 | Not Available | Negative | 1898313 - 1899080 | 28398.7 |
| branched chain amino acid abc transporter permease livm | AM464_RS09960 | Not Available | Negative | 1899077 - 1900354 | 46292.2 |
| high-affinity branched-chain amino acid abc transporter permease livh | AM464_RS09965 | Not Available | Negative | 1900351 - 1901277 | 32984.4 |
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | AM464_RS09970 | Not Available | Negative | 1901325 - 1902434 | 39380.9 |
| aspartate 1-decarboxylase autocleavage activator panm | AM464_RS09975 | Not Available | Positive | 1902858 - 1903241 | 14545.3 |
| branched chain amino acid abc transporter substrate-binding protein livj | AM464_RS09980 | Not Available | Negative | 1903441 - 1904544 | 39108.6 |
| rna polymerase sigma factor rpoh | AM464_RS09985 | Not Available | Negative | 1904815 - 1905669 | 32470.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




